Cluster: Rep_3552_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3552
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3552_c_1 | Rep_3552_c_1_132 | 147812 | 148363 | + | 3.A.1.25.5 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_133 | 148597 | 149847 | - | PGA_cap |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_134 | 149884 | 150657 | - | DUF975 |
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_135 | 150756 | 153362 | + | GT2 |
Gene ID: Rep_3552_c_1_132
Type: TC
Location: 147812 - 148363 (+)
Type: TC
Location: 147812 - 148363 (+)
Gene ID: Rep_3552_c_1_133
Type: pfam
Location: 148597 - 149847 (-)
Type: pfam
Location: 148597 - 149847 (-)
Gene ID: Rep_3552_c_1_134
Type: pfam
Location: 149884 - 150657 (-)
Type: pfam
Location: 149884 - 150657 (-)
Gene ID: Rep_3552_c_1_135
Type: CAZyme
Location: 150756 - 153362 (+)
Type: CAZyme
Location: 150756 - 153362 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Species
CAG-488 sp000434915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.