dbCAN Logo

Cluster: Rep_3524_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3524_c_0 Rep_3524_c_0_622 620844 622772 + CBM48 | GH13_9
pfam Rep_3524_c_0 Rep_3524_c_0_623 622797 624005 + NTP_transferase | Hexapep_GlmU
pfam Rep_3524_c_0 Rep_3524_c_0_624 624010 625134 + NTP_transferase | Hexapep_GlmU
CAZyme Rep_3524_c_0 Rep_3524_c_0_625 625147 626574 + GT5
pfam Rep_3524_c_0 Rep_3524_c_0_626 626660 627697 - DUF5692
CAZyme Rep_3524_c_0 Rep_3524_c_0_627 628020 630518 - GH3
NULL(UNKNOWN) Rep_3524_c_0 Rep_3524_c_0_628 630637 631233 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3524_c_0 Rep_3524_c_0_629 631252 632715 - 2.A.25.1.4
Gene ID: Rep_3524_c_0_622
Type: CAZyme
Location: 620844 - 622772 (+)
Gene ID: Rep_3524_c_0_623
Type: pfam
Location: 622797 - 624005 (+)
Gene ID: Rep_3524_c_0_624
Type: pfam
Location: 624010 - 625134 (+)
Gene ID: Rep_3524_c_0_625
Type: CAZyme
Location: 625147 - 626574 (+)
Gene ID: Rep_3524_c_0_626
Type: pfam
Location: 626660 - 627697 (-)
Gene ID: Rep_3524_c_0_627
Type: CAZyme
Location: 628020 - 630518 (-)
Gene ID: Rep_3524_c_0_628
Type:
Location: 630637 - 631233 (-)
Gene ID: Rep_3524_c_0_629
Type: TC
Location: 631252 - 632715 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List