Cluster: Rep_3524_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3524
- CGC Family ID: CGCFAM_00978
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3524_c_0 | Rep_3524_c_0_1569 | 1690656 | 1693376 | + | GT2 |
| pfam | Rep_3524_c_0 | Rep_3524_c_0_1570 | 1693432 | 1693776 | - | DUF4363 |
| pfam | Rep_3524_c_0 | Rep_3524_c_0_1571 | 1693773 | 1694177 | - | DUF421 |
| TC | Rep_3524_c_0 | Rep_3524_c_0_1572 | 1694539 | 1695993 | + | 9.A.11.1.2 |
Gene ID: Rep_3524_c_0_1569
Type: CAZyme
Location: 1690656 - 1693376 (+)
Type: CAZyme
Location: 1690656 - 1693376 (+)
Gene ID: Rep_3524_c_0_1570
Type: pfam
Location: 1693432 - 1693776 (-)
Type: pfam
Location: 1693432 - 1693776 (-)
Gene ID: Rep_3524_c_0_1571
Type: pfam
Location: 1693773 - 1694177 (-)
Type: pfam
Location: 1693773 - 1694177 (-)
Gene ID: Rep_3524_c_0_1572
Type: TC
Location: 1694539 - 1695993 (+)
Type: TC
Location: 1694539 - 1695993 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp003526845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.