Cluster: Rep_3524_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3524
- CGC Family ID: CGCFAM_07677
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3524_c_0 | Rep_3524_c_0_1316 | 1400946 | 1402871 | + | GH127 |
| pfam | Rep_3524_c_0 | Rep_3524_c_0_1317 | 1402874 | 1403404 | + | DUF3877 |
| pfam | Rep_3524_c_0 | Rep_3524_c_0_1318 | 1403662 | 1405038 | + | Lyase_1 | FumaraseC_C |
| TC | Rep_3524_c_0 | Rep_3524_c_0_1319 | 1405088 | 1405870 | + | 3.D.10.1.4 |
Gene ID: Rep_3524_c_0_1316
Type: CAZyme
Location: 1400946 - 1402871 (+)
Type: CAZyme
Location: 1400946 - 1402871 (+)
Gene ID: Rep_3524_c_0_1317
Type: pfam
Location: 1402874 - 1403404 (+)
Type: pfam
Location: 1402874 - 1403404 (+)
Gene ID: Rep_3524_c_0_1318
Type: pfam
Location: 1403662 - 1405038 (+)
Type: pfam
Location: 1403662 - 1405038 (+)
Gene ID: Rep_3524_c_0_1319
Type: TC
Location: 1405088 - 1405870 (+)
Type: TC
Location: 1405088 - 1405870 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp003526845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.