Cluster: Rep_3524_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: galactan
- Genome ID: Rep_3524
- CGC Family ID: CGCFAM_00078
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3524_c_0 | Rep_3524_c_0_916 | 946316 | 949501 | - | GH38 |
| NULL(UNKNOWN) | Rep_3524_c_0 | Rep_3524_c_0_917 | 949517 | 950113 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3524_c_0 | Rep_3524_c_0_918 | 950106 | 951566 | - | 2.A.2.3.2 |
| CAZyme | Rep_3524_c_0 | Rep_3524_c_0_919 | 951604 | 952968 | - | GH4 |
Gene ID: Rep_3524_c_0_916
Type: CAZyme
Location: 946316 - 949501 (-)
Type: CAZyme
Location: 946316 - 949501 (-)
Gene ID: Rep_3524_c_0_917
Type:
Location: 949517 - 950113 (-)
Type:
Location: 949517 - 950113 (-)
Gene ID: Rep_3524_c_0_918
Type: TC
Location: 950106 - 951566 (-)
Type: TC
Location: 950106 - 951566 (-)
Gene ID: Rep_3524_c_0_919
Type: CAZyme
Location: 951604 - 952968 (-)
Type: CAZyme
Location: 951604 - 952968 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp003526845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.