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Cluster: Rep_3524_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3524_c_0 Rep_3524_c_0_719 734634 736001 - 3.D.10.1.6
pfam Rep_3524_c_0 Rep_3524_c_0_720 736163 736729 + HAD
pfam Rep_3524_c_0 Rep_3524_c_0_721 736747 738129 + Metallophos
CAZyme Rep_3524_c_0 Rep_3524_c_0_722 738277 741045 + GT2
peptidase Rep_3524_c_0 Rep_3524_c_0_723 741121 742377 - M42.UPW
CAZyme Rep_3524_c_0 Rep_3524_c_0_724 742507 743883 - CE4
TC Rep_3524_c_0 Rep_3524_c_0_725 744113 746116 + 3.D.1.4.2
TC Rep_3524_c_0 Rep_3524_c_0_726 746116 747021 + 3.D.1.4.2
TC Rep_3524_c_0 Rep_3524_c_0_727 747021 747494 + 3.D.1.4.2
pfam Rep_3524_c_0 Rep_3524_c_0_728 747487 747867 + Complex1_30kDa
TC Rep_3524_c_0 Rep_3524_c_0_729 747867 748946 + 3.D.1.4.2
TC Rep_3524_c_0 Rep_3524_c_0_730 748960 749541 + 3.D.1.4.2
Gene ID: Rep_3524_c_0_719
Type: TC
Location: 734634 - 736001 (-)
Gene ID: Rep_3524_c_0_720
Type: pfam
Location: 736163 - 736729 (+)
Gene ID: Rep_3524_c_0_721
Type: pfam
Location: 736747 - 738129 (+)
Gene ID: Rep_3524_c_0_722
Type: CAZyme
Location: 738277 - 741045 (+)
Gene ID: Rep_3524_c_0_723
Type: peptidase
Location: 741121 - 742377 (-)
Gene ID: Rep_3524_c_0_724
Type: CAZyme
Location: 742507 - 743883 (-)
Gene ID: Rep_3524_c_0_725
Type: TC
Location: 744113 - 746116 (+)
Gene ID: Rep_3524_c_0_726
Type: TC
Location: 746116 - 747021 (+)
Gene ID: Rep_3524_c_0_727
Type: TC
Location: 747021 - 747494 (+)
Gene ID: Rep_3524_c_0_728
Type: pfam
Location: 747487 - 747867 (+)
Gene ID: Rep_3524_c_0_729
Type: TC
Location: 747867 - 748946 (+)
Gene ID: Rep_3524_c_0_730
Type: TC
Location: 748960 - 749541 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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