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Cluster: Rep_3524_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3524_c_0 Rep_3524_c_0_702 717373 718200 + 8.A.3.2.3
TC Rep_3524_c_0 Rep_3524_c_0_703 718190 718951 + 8.A.3.2.1
TC Rep_3524_c_0 Rep_3524_c_0_704 718961 720412 + 9.B.18.1.2
CAZyme Rep_3524_c_0 Rep_3524_c_0_705 720431 721552 + GT4
CAZyme Rep_3524_c_0 Rep_3524_c_0_706 721554 722738 + GT4
pfam Rep_3524_c_0 Rep_3524_c_0_707 722756 723934 + Radical_SAM | SPASM
CAZyme Rep_3524_c_0 Rep_3524_c_0_708 723938 725023 + GT4
CAZyme Rep_3524_c_0 Rep_3524_c_0_709 725025 725933 + GT32
Gene ID: Rep_3524_c_0_702
Type: TC
Location: 717373 - 718200 (+)
Gene ID: Rep_3524_c_0_703
Type: TC
Location: 718190 - 718951 (+)
Gene ID: Rep_3524_c_0_704
Type: TC
Location: 718961 - 720412 (+)
Gene ID: Rep_3524_c_0_705
Type: CAZyme
Location: 720431 - 721552 (+)
Gene ID: Rep_3524_c_0_706
Type: CAZyme
Location: 721554 - 722738 (+)
Gene ID: Rep_3524_c_0_707
Type: pfam
Location: 722756 - 723934 (+)
Gene ID: Rep_3524_c_0_708
Type: CAZyme
Location: 723938 - 725023 (+)
Gene ID: Rep_3524_c_0_709
Type: CAZyme
Location: 725025 - 725933 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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