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Cluster: Rep_3514_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3514_c_11 Rep_3514_c_11_1 90 797 + 9.B.18.1.3
TC Rep_3514_c_11 Rep_3514_c_11_2 802 1746 + 8.A.5.1.4
pfam Rep_3514_c_11 Rep_3514_c_11_3 1777 2628 + Transketolase_N | E1_dh | DXP_synthase_N
pfam Rep_3514_c_11 Rep_3514_c_11_4 2642 3559 + Transket_pyr | Transketolase_C
CAZyme Rep_3514_c_11 Rep_3514_c_11_5 3580 4722 + GT4
CAZyme Rep_3514_c_11 Rep_3514_c_11_6 4719 5810 + GT4
pfam Rep_3514_c_11 Rep_3514_c_11_7 5844 7037 + EpsG
CAZyme Rep_3514_c_11 Rep_3514_c_11_8 7055 7987 + GT2
CAZyme Rep_3514_c_11 Rep_3514_c_11_9 8170 9108 + GT2
CAZyme Rep_3514_c_11 Rep_3514_c_11_10 9114 10094 + GT2
Gene ID: Rep_3514_c_11_1
Type: TC
Location: 90 - 797 (+)
Gene ID: Rep_3514_c_11_2
Type: TC
Location: 802 - 1746 (+)
Gene ID: Rep_3514_c_11_3
Type: pfam
Location: 1777 - 2628 (+)
Gene ID: Rep_3514_c_11_4
Type: pfam
Location: 2642 - 3559 (+)
Gene ID: Rep_3514_c_11_5
Type: CAZyme
Location: 3580 - 4722 (+)
Gene ID: Rep_3514_c_11_6
Type: CAZyme
Location: 4719 - 5810 (+)
Gene ID: Rep_3514_c_11_7
Type: pfam
Location: 5844 - 7037 (+)
Gene ID: Rep_3514_c_11_8
Type: CAZyme
Location: 7055 - 7987 (+)
Gene ID: Rep_3514_c_11_9
Type: CAZyme
Location: 8170 - 9108 (+)
Gene ID: Rep_3514_c_11_10
Type: CAZyme
Location: 9114 - 10094 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Eubacterium_R
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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