Cluster: Rep_3514_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3514
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3514_c_91 | Rep_3514_c_91_17 | 19087 | 19980 | - | GT2 |
| pfam | Rep_3514_c_91 | Rep_3514_c_91_18 | 19982 | 21157 | - | Radical_SAM | SPASM |
| CAZyme | Rep_3514_c_91 | Rep_3514_c_91_19 | 21295 | 22500 | - | GT4 |
| CAZyme | Rep_3514_c_91 | Rep_3514_c_91_20 | 22500 | 23633 | - | GT4 |
| TC | Rep_3514_c_91 | Rep_3514_c_91_21 | 23630 | 25126 | - | 9.B.18.1.2 |
| TC | Rep_3514_c_91 | Rep_3514_c_91_22 | 25170 | 25934 | - | 8.A.3.2.1 |
| TC | Rep_3514_c_91 | Rep_3514_c_91_23 | 25934 | 26713 | - | 8.A.3.2.3 |
Gene ID: Rep_3514_c_91_17
Type: CAZyme
Location: 19087 - 19980 (-)
Type: CAZyme
Location: 19087 - 19980 (-)
Gene ID: Rep_3514_c_91_18
Type: pfam
Location: 19982 - 21157 (-)
Type: pfam
Location: 19982 - 21157 (-)
Gene ID: Rep_3514_c_91_19
Type: CAZyme
Location: 21295 - 22500 (-)
Type: CAZyme
Location: 21295 - 22500 (-)
Gene ID: Rep_3514_c_91_20
Type: CAZyme
Location: 22500 - 23633 (-)
Type: CAZyme
Location: 22500 - 23633 (-)
Gene ID: Rep_3514_c_91_21
Type: TC
Location: 23630 - 25126 (-)
Type: TC
Location: 23630 - 25126 (-)
Gene ID: Rep_3514_c_91_22
Type: TC
Location: 25170 - 25934 (-)
Type: TC
Location: 25170 - 25934 (-)
Gene ID: Rep_3514_c_91_23
Type: TC
Location: 25934 - 26713 (-)
Type: TC
Location: 25934 - 26713 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.