Cluster: Rep_3514_CGC28
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3514
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3514_c_63 | Rep_3514_c_63_19 | 16875 | 17831 | - | GT2 |
| NULL(UNKNOWN) | Rep_3514_c_63 | Rep_3514_c_63_20 | 18150 | 19418 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3514_c_63 | Rep_3514_c_63_21 | 19484 | 20233 | - | VTT_dom |
| CAZyme | Rep_3514_c_63 | Rep_3514_c_63_22 | 20233 | 21042 | - | GT8 |
| STP | Rep_3514_c_63 | Rep_3514_c_63_23 | 21230 | 22324 | - | ATPase_2 |
| TF | Rep_3514_c_63 | Rep_3514_c_63_24 | 22263 | 22601 | - | HTH_1 |
| TC | Rep_3514_c_63 | Rep_3514_c_63_25 | 22616 | 23359 | - | 3.A.1.14.7 |
| TC | Rep_3514_c_63 | Rep_3514_c_63_26 | 23385 | 24371 | - | 3.A.1.14.11 |
Gene ID: Rep_3514_c_63_19
Type: CAZyme
Location: 16875 - 17831 (-)
Type: CAZyme
Location: 16875 - 17831 (-)
Gene ID: Rep_3514_c_63_20
Type:
Location: 18150 - 19418 (+)
Type:
Location: 18150 - 19418 (+)
Gene ID: Rep_3514_c_63_21
Type: pfam
Location: 19484 - 20233 (-)
Type: pfam
Location: 19484 - 20233 (-)
Gene ID: Rep_3514_c_63_22
Type: CAZyme
Location: 20233 - 21042 (-)
Type: CAZyme
Location: 20233 - 21042 (-)
Gene ID: Rep_3514_c_63_23
Type: STP
Location: 21230 - 22324 (-)
Type: STP
Location: 21230 - 22324 (-)
Gene ID: Rep_3514_c_63_24
Type: TF
Location: 22263 - 22601 (-)
Type: TF
Location: 22263 - 22601 (-)
Gene ID: Rep_3514_c_63_25
Type: TC
Location: 22616 - 23359 (-)
Type: TC
Location: 22616 - 23359 (-)
Gene ID: Rep_3514_c_63_26
Type: TC
Location: 23385 - 24371 (-)
Type: TC
Location: 23385 - 24371 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.