Cluster: Rep_3514_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3514
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3514_c_60 | Rep_3514_c_60_44 | 46650 | 47594 | + | 1.A.35.3.2 |
| pfam | Rep_3514_c_60 | Rep_3514_c_60_45 | 47599 | 49740 | + | S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5 |
| CAZyme | Rep_3514_c_60 | Rep_3514_c_60_46 | 49897 | 51318 | - | GT5 |
| pfam | Rep_3514_c_60 | Rep_3514_c_60_47 | 51337 | 52461 | - | NTP_transferase | Hexapep_GlmU |
| pfam | Rep_3514_c_60 | Rep_3514_c_60_48 | 52464 | 53672 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | Rep_3514_c_60 | Rep_3514_c_60_49 | 53686 | 55566 | - | GH13_9 |
Gene ID: Rep_3514_c_60_44
Type: TC
Location: 46650 - 47594 (+)
Type: TC
Location: 46650 - 47594 (+)
Gene ID: Rep_3514_c_60_45
Type: pfam
Location: 47599 - 49740 (+)
Type: pfam
Location: 47599 - 49740 (+)
Gene ID: Rep_3514_c_60_46
Type: CAZyme
Location: 49897 - 51318 (-)
Type: CAZyme
Location: 49897 - 51318 (-)
Gene ID: Rep_3514_c_60_47
Type: pfam
Location: 51337 - 52461 (-)
Type: pfam
Location: 51337 - 52461 (-)
Gene ID: Rep_3514_c_60_48
Type: pfam
Location: 52464 - 53672 (-)
Type: pfam
Location: 52464 - 53672 (-)
Gene ID: Rep_3514_c_60_49
Type: CAZyme
Location: 53686 - 55566 (-)
Type: CAZyme
Location: 53686 - 55566 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3514_c_60_46 | vegan > omnivore | 1.10658 | 0.03673 |