Cluster: Rep_3514_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3514
- CGC Family ID: CGCFAM_01524
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3514_c_60 | Rep_3514_c_60_1 | 214 | 2241 | - | 3.A.1.134.10 |
| TC | Rep_3514_c_60 | Rep_3514_c_60_2 | 2238 | 3002 | - | 3.A.1.134.4 |
| STP | Rep_3514_c_60 | Rep_3514_c_60_3 | 3109 | 4095 | - | HATPase_c |
| TF | Rep_3514_c_60 | Rep_3514_c_60_4 | 4105 | 4776 | - | Trans_reg_C |
| CAZyme | Rep_3514_c_60 | Rep_3514_c_60_5 | 4934 | 6556 | - | GH123 |
Gene ID: Rep_3514_c_60_1
Type: TC
Location: 214 - 2241 (-)
Type: TC
Location: 214 - 2241 (-)
Gene ID: Rep_3514_c_60_2
Type: TC
Location: 2238 - 3002 (-)
Type: TC
Location: 2238 - 3002 (-)
Gene ID: Rep_3514_c_60_3
Type: STP
Location: 3109 - 4095 (-)
Type: STP
Location: 3109 - 4095 (-)
Gene ID: Rep_3514_c_60_4
Type: TF
Location: 4105 - 4776 (-)
Type: TF
Location: 4105 - 4776 (-)
Gene ID: Rep_3514_c_60_5
Type: CAZyme
Location: 4934 - 6556 (-)
Type: CAZyme
Location: 4934 - 6556 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.