Cluster: Rep_3514_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3514
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3514_c_5 | Rep_3514_c_5_1 | 49 | 1179 | + | GT2 |
| pfam | Rep_3514_c_5 | Rep_3514_c_5_2 | 1195 | 2307 | + | GLF | NAD_binding_8 |
| CAZyme | Rep_3514_c_5 | Rep_3514_c_5_3 | 2371 | 3534 | + | GT2 |
| CAZyme | Rep_3514_c_5 | Rep_3514_c_5_4 | 3531 | 4493 | + | GT2 |
| TC | Rep_3514_c_5 | Rep_3514_c_5_5 | 4650 | 5297 | - | 2.A.38.4.3 |
| TC | Rep_3514_c_5 | Rep_3514_c_5_6 | 5322 | 6602 | - | 2.A.38.4.1 |
Gene ID: Rep_3514_c_5_1
Type: CAZyme
Location: 49 - 1179 (+)
Type: CAZyme
Location: 49 - 1179 (+)
Gene ID: Rep_3514_c_5_2
Type: pfam
Location: 1195 - 2307 (+)
Type: pfam
Location: 1195 - 2307 (+)
Gene ID: Rep_3514_c_5_3
Type: CAZyme
Location: 2371 - 3534 (+)
Type: CAZyme
Location: 2371 - 3534 (+)
Gene ID: Rep_3514_c_5_4
Type: CAZyme
Location: 3531 - 4493 (+)
Type: CAZyme
Location: 3531 - 4493 (+)
Gene ID: Rep_3514_c_5_5
Type: TC
Location: 4650 - 5297 (-)
Type: TC
Location: 4650 - 5297 (-)
Gene ID: Rep_3514_c_5_6
Type: TC
Location: 5322 - 6602 (-)
Type: TC
Location: 5322 - 6602 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.