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Cluster: Rep_3514_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3514_c_44 Rep_3514_c_44_1 30 1043 + 2.A.119.1.3
pfam Rep_3514_c_44 Rep_3514_c_44_2 1131 1496 + Thioredoxin_3
CAZyme Rep_3514_c_44 Rep_3514_c_44_3 1698 3890 - GH141
TF Rep_3514_c_44 Rep_3514_c_44_4 3961 4980 - LacI
CAZyme Rep_3514_c_44 Rep_3514_c_44_5 5241 6293 + GH179
pfam Rep_3514_c_44 Rep_3514_c_44_6 6296 7210 + AP_endonuc_2
pfam Rep_3514_c_44 Rep_3514_c_44_7 7267 8346 + Peripla_BP_4
TC Rep_3514_c_44 Rep_3514_c_44_8 8437 9930 + 3.A.1.2.20
TC Rep_3514_c_44 Rep_3514_c_44_9 9930 10991 + 3.A.1.2.1
TC Rep_3514_c_44 Rep_3514_c_44_10 11048 12079 - 2.A.98.1.4
Gene ID: Rep_3514_c_44_1
Type: TC
Location: 30 - 1043 (+)
Gene ID: Rep_3514_c_44_2
Type: pfam
Location: 1131 - 1496 (+)
Gene ID: Rep_3514_c_44_3
Type: CAZyme
Location: 1698 - 3890 (-)
Gene ID: Rep_3514_c_44_4
Type: TF
Location: 3961 - 4980 (-)
Gene ID: Rep_3514_c_44_5
Type: CAZyme
Location: 5241 - 6293 (+)
Gene ID: Rep_3514_c_44_6
Type: pfam
Location: 6296 - 7210 (+)
Gene ID: Rep_3514_c_44_7
Type: pfam
Location: 7267 - 8346 (+)
Gene ID: Rep_3514_c_44_8
Type: TC
Location: 8437 - 9930 (+)
Gene ID: Rep_3514_c_44_9
Type: TC
Location: 9930 - 10991 (+)
Gene ID: Rep_3514_c_44_10
Type: TC
Location: 11048 - 12079 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Eubacterium_R
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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