Cluster: Rep_3508_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3508
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3508_c_21 | Rep_3508_c_21_1 | 87 | 1598 | + | GH77 |
| NULL(UNKNOWN) | Rep_3508_c_21 | Rep_3508_c_21_2 | 1683 | 2507 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3508_c_21 | Rep_3508_c_21_3 | 2636 | 4840 | - | UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor |
| TC | Rep_3508_c_21 | Rep_3508_c_21_4 | 4981 | 6192 | - | 3.B.1.1.2 |
Gene ID: Rep_3508_c_21_1
Type: CAZyme
Location: 87 - 1598 (+)
Type: CAZyme
Location: 87 - 1598 (+)
Gene ID: Rep_3508_c_21_2
Type:
Location: 1683 - 2507 (+)
Type:
Location: 1683 - 2507 (+)
Gene ID: Rep_3508_c_21_3
Type: pfam
Location: 2636 - 4840 (-)
Type: pfam
Location: 2636 - 4840 (-)
Gene ID: Rep_3508_c_21_4
Type: TC
Location: 4981 - 6192 (-)
Type: TC
Location: 4981 - 6192 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp902489595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.