Cluster: Rep_3508_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3508
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3508_c_12 | Rep_3508_c_12_11 | 9040 | 11517 | - | GH3 |
| pfam | Rep_3508_c_12 | Rep_3508_c_12_12 | 11810 | 12142 | - | SCP2 |
| TC | Rep_3508_c_12 | Rep_3508_c_12_13 | 12214 | 12567 | - | 9.A.11.1.1 |
| TC | Rep_3508_c_12 | Rep_3508_c_12_14 | 12638 | 13384 | - | 3.A.1.122.14 |
| TC | Rep_3508_c_12 | Rep_3508_c_12_15 | 13502 | 13945 | + | 9.A.11.1.1 |
Gene ID: Rep_3508_c_12_11
Type: CAZyme
Location: 9040 - 11517 (-)
Type: CAZyme
Location: 9040 - 11517 (-)
Gene ID: Rep_3508_c_12_12
Type: pfam
Location: 11810 - 12142 (-)
Type: pfam
Location: 11810 - 12142 (-)
Gene ID: Rep_3508_c_12_13
Type: TC
Location: 12214 - 12567 (-)
Type: TC
Location: 12214 - 12567 (-)
Gene ID: Rep_3508_c_12_14
Type: TC
Location: 12638 - 13384 (-)
Type: TC
Location: 12638 - 13384 (-)
Gene ID: Rep_3508_c_12_15
Type: TC
Location: 13502 - 13945 (+)
Type: TC
Location: 13502 - 13945 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp902489595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3508_c_12_14 | vegetarian > omnivore | 1.71826 | 0.02132 |