Cluster: Rep_3508_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3508
- CGC Family ID: CGCFAM_02413
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3508_c_65 | Rep_3508_c_65_1 | 1400 | 2029 | + | CE3 |
| TC | Rep_3508_c_65 | Rep_3508_c_65_2 | 2253 | 3575 | + | 9.A.40.2.1 |
| pfam | Rep_3508_c_65 | Rep_3508_c_65_3 | 3858 | 4322 | + | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| pfam | Rep_3508_c_65 | Rep_3508_c_65_4 | 4620 | 5141 | + | Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_4 |
| TC | Rep_3508_c_65 | Rep_3508_c_65_5 | 5233 | 6609 | + | 2.A.2.3.6 |
Gene ID: Rep_3508_c_65_1
Type: CAZyme
Location: 1400 - 2029 (+)
Type: CAZyme
Location: 1400 - 2029 (+)
Gene ID: Rep_3508_c_65_2
Type: TC
Location: 2253 - 3575 (+)
Type: TC
Location: 2253 - 3575 (+)
Gene ID: Rep_3508_c_65_3
Type: pfam
Location: 3858 - 4322 (+)
Type: pfam
Location: 3858 - 4322 (+)
Gene ID: Rep_3508_c_65_4
Type: pfam
Location: 4620 - 5141 (+)
Type: pfam
Location: 4620 - 5141 (+)
Gene ID: Rep_3508_c_65_5
Type: TC
Location: 5233 - 6609 (+)
Type: TC
Location: 5233 - 6609 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp902489595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.