Cluster: Rep_3508_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3508
- CGC Family ID: CGCFAM_03502
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3508_c_60 | Rep_3508_c_60_2 | 2209 | 3732 | - | GH30_4 |
| STP | Rep_3508_c_60 | Rep_3508_c_60_3 | 3961 | 4668 | - | Pribosyltran |
| TC | Rep_3508_c_60 | Rep_3508_c_60_4 | 4665 | 5099 | - | 3.A.11.1.1 |
| pfam | Rep_3508_c_60 | Rep_3508_c_60_5 | 5059 | 6927 | - | Radical_SAM | Radical_SAM_N | DUF3362 |
| TC | Rep_3508_c_60 | Rep_3508_c_60_6 | 6920 | 9445 | - | 3.A.12.1.1 |
Gene ID: Rep_3508_c_60_2
Type: CAZyme
Location: 2209 - 3732 (-)
Type: CAZyme
Location: 2209 - 3732 (-)
Gene ID: Rep_3508_c_60_3
Type: STP
Location: 3961 - 4668 (-)
Type: STP
Location: 3961 - 4668 (-)
Gene ID: Rep_3508_c_60_4
Type: TC
Location: 4665 - 5099 (-)
Type: TC
Location: 4665 - 5099 (-)
Gene ID: Rep_3508_c_60_5
Type: pfam
Location: 5059 - 6927 (-)
Type: pfam
Location: 5059 - 6927 (-)
Gene ID: Rep_3508_c_60_6
Type: TC
Location: 6920 - 9445 (-)
Type: TC
Location: 6920 - 9445 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp902489595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.