Cluster: Rep_3508_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3508
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3508_c_36 | Rep_3508_c_36_1 | 93 | 1604 | + | 4.C.1.1.7 |
| pfam | Rep_3508_c_36 | Rep_3508_c_36_2 | 1623 | 1853 | + | PP-binding |
| TC | Rep_3508_c_36 | Rep_3508_c_36_3 | 1857 | 3431 | + | 2.A.50.2.1 |
| NULL(UNKNOWN) | Rep_3508_c_36 | Rep_3508_c_36_4 | 3448 | 4551 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | Rep_3508_c_36 | Rep_3508_c_36_5 | 4604 | 5506 | - | PfkB |
| CAZyme | Rep_3508_c_36 | Rep_3508_c_36_6 | 5506 | 6870 | - | GH4 |
Gene ID: Rep_3508_c_36_1
Type: TC
Location: 93 - 1604 (+)
Type: TC
Location: 93 - 1604 (+)
Gene ID: Rep_3508_c_36_2
Type: pfam
Location: 1623 - 1853 (+)
Type: pfam
Location: 1623 - 1853 (+)
Gene ID: Rep_3508_c_36_3
Type: TC
Location: 1857 - 3431 (+)
Type: TC
Location: 1857 - 3431 (+)
Gene ID: Rep_3508_c_36_4
Type:
Location: 3448 - 4551 (+)
Type:
Location: 3448 - 4551 (+)
Gene ID: Rep_3508_c_36_5
Type: STP
Location: 4604 - 5506 (-)
Type: STP
Location: 4604 - 5506 (-)
Gene ID: Rep_3508_c_36_6
Type: CAZyme
Location: 5506 - 6870 (-)
Type: CAZyme
Location: 5506 - 6870 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp902489595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.