Cluster: Rep_3508_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3508
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3508_c_34 | Rep_3508_c_34_3 | 952 | 1680 | + | 3.A.16.1.3 |
| CAZyme | Rep_3508_c_34 | Rep_3508_c_34_4 | 1680 | 3233 | + | GH28 |
| NULL(UNKNOWN) | Rep_3508_c_34 | Rep_3508_c_34_5 | 3262 | 3726 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3508_c_34 | Rep_3508_c_34_6 | 3893 | 6394 | - | FtsX | FtsX |
| TC | Rep_3508_c_34 | Rep_3508_c_34_7 | 6391 | 7074 | - | 3.A.1.125.3 |
Gene ID: Rep_3508_c_34_3
Type: TC
Location: 952 - 1680 (+)
Type: TC
Location: 952 - 1680 (+)
Gene ID: Rep_3508_c_34_4
Type: CAZyme
Location: 1680 - 3233 (+)
Type: CAZyme
Location: 1680 - 3233 (+)
Gene ID: Rep_3508_c_34_5
Type:
Location: 3262 - 3726 (-)
Type:
Location: 3262 - 3726 (-)
Gene ID: Rep_3508_c_34_6
Type: pfam
Location: 3893 - 6394 (-)
Type: pfam
Location: 3893 - 6394 (-)
Gene ID: Rep_3508_c_34_7
Type: TC
Location: 6391 - 7074 (-)
Type: TC
Location: 6391 - 7074 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp902489595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3508_c_34_7 | vegetarian > omnivore | 1.00899 | 0.02132 |