Cluster: Rep_3508_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3508
- CGC Family ID: CGCFAM_00022
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3508_c_0 | Rep_3508_c_0_11 | 12737 | 13522 | + | 8.A.3.2.1 |
| TC | Rep_3508_c_0 | Rep_3508_c_0_12 | 13561 | 15069 | + | 9.B.18.1.2 |
| CAZyme | Rep_3508_c_0 | Rep_3508_c_0_13 | 15109 | 16224 | + | GT4 |
| pfam | Rep_3508_c_0 | Rep_3508_c_0_14 | 16214 | 17266 | + | Acyl_transf_3 |
| CAZyme | Rep_3508_c_0 | Rep_3508_c_0_15 | 17263 | 18450 | + | GT4 |
Gene ID: Rep_3508_c_0_11
Type: TC
Location: 12737 - 13522 (+)
Type: TC
Location: 12737 - 13522 (+)
Gene ID: Rep_3508_c_0_12
Type: TC
Location: 13561 - 15069 (+)
Type: TC
Location: 13561 - 15069 (+)
Gene ID: Rep_3508_c_0_13
Type: CAZyme
Location: 15109 - 16224 (+)
Type: CAZyme
Location: 15109 - 16224 (+)
Gene ID: Rep_3508_c_0_14
Type: pfam
Location: 16214 - 17266 (+)
Type: pfam
Location: 16214 - 17266 (+)
Gene ID: Rep_3508_c_0_15
Type: CAZyme
Location: 17263 - 18450 (+)
Type: CAZyme
Location: 17263 - 18450 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp902489595
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.