Cluster: Rep_3506_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3506
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3506_c_71 | Rep_3506_c_71_5 | 4151 | 6895 | - | 3.A.5.1.3 |
| NULL(UNKNOWN) | Rep_3506_c_71 | Rep_3506_c_71_6 | 6975 | 7568 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3506_c_71 | Rep_3506_c_71_7 | 7766 | 8383 | + | 9.B.18.1.2 |
| CAZyme | Rep_3506_c_71 | Rep_3506_c_71_8 | 8405 | 11464 | + | GH2 |
| pfam | Rep_3506_c_71 | Rep_3506_c_71_9 | 11613 | 13043 | + | Radical_SAM |
| TC | Rep_3506_c_71 | Rep_3506_c_71_10 | 13122 | 14399 | + | 9.A.40.2.2 |
Gene ID: Rep_3506_c_71_5
Type: TC
Location: 4151 - 6895 (-)
Type: TC
Location: 4151 - 6895 (-)
Gene ID: Rep_3506_c_71_6
Type:
Location: 6975 - 7568 (-)
Type:
Location: 6975 - 7568 (-)
Gene ID: Rep_3506_c_71_7
Type: TC
Location: 7766 - 8383 (+)
Type: TC
Location: 7766 - 8383 (+)
Gene ID: Rep_3506_c_71_8
Type: CAZyme
Location: 8405 - 11464 (+)
Type: CAZyme
Location: 8405 - 11464 (+)
Gene ID: Rep_3506_c_71_9
Type: pfam
Location: 11613 - 13043 (+)
Type: pfam
Location: 11613 - 13043 (+)
Gene ID: Rep_3506_c_71_10
Type: TC
Location: 13122 - 14399 (+)
Type: TC
Location: 13122 - 14399 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.