Cluster: Rep_3506_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3506
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3506_c_54 | Rep_3506_c_54_20 | 22302 | 22883 | - | 3.D.1.4.2 |
| TC | Rep_3506_c_54 | Rep_3506_c_54_21 | 22897 | 23976 | - | 3.D.1.4.2 |
| pfam | Rep_3506_c_54 | Rep_3506_c_54_22 | 23976 | 24365 | - | Complex1_30kDa |
| TC | Rep_3506_c_54 | Rep_3506_c_54_23 | 24366 | 24800 | - | 3.D.1.4.2 |
| TC | Rep_3506_c_54 | Rep_3506_c_54_24 | 24800 | 25690 | - | 3.D.1.4.2 |
| TC | Rep_3506_c_54 | Rep_3506_c_54_25 | 25690 | 27600 | - | 3.D.1.4.2 |
| CAZyme | Rep_3506_c_54 | Rep_3506_c_54_26 | 27900 | 29231 | + | CE4 |
Gene ID: Rep_3506_c_54_20
Type: TC
Location: 22302 - 22883 (-)
Type: TC
Location: 22302 - 22883 (-)
Gene ID: Rep_3506_c_54_21
Type: TC
Location: 22897 - 23976 (-)
Type: TC
Location: 22897 - 23976 (-)
Gene ID: Rep_3506_c_54_22
Type: pfam
Location: 23976 - 24365 (-)
Type: pfam
Location: 23976 - 24365 (-)
Gene ID: Rep_3506_c_54_23
Type: TC
Location: 24366 - 24800 (-)
Type: TC
Location: 24366 - 24800 (-)
Gene ID: Rep_3506_c_54_24
Type: TC
Location: 24800 - 25690 (-)
Type: TC
Location: 24800 - 25690 (-)
Gene ID: Rep_3506_c_54_25
Type: TC
Location: 25690 - 27600 (-)
Type: TC
Location: 25690 - 27600 (-)
Gene ID: Rep_3506_c_54_26
Type: CAZyme
Location: 27900 - 29231 (+)
Type: CAZyme
Location: 27900 - 29231 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.