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Cluster: Rep_3506_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3506_c_30 Rep_3506_c_30_19 20311 21261 - GT2
CAZyme Rep_3506_c_30 Rep_3506_c_30_20 21258 22274 - GT2
pfam Rep_3506_c_30 Rep_3506_c_30_21 22279 23520 - EpsG
CAZyme Rep_3506_c_30 Rep_3506_c_30_22 23540 24667 - GT4
CAZyme Rep_3506_c_30 Rep_3506_c_30_23 24672 25670 - GT2
pfam Rep_3506_c_30 Rep_3506_c_30_24 25667 26593 - GINT1_N
CAZyme Rep_3506_c_30 Rep_3506_c_30_25 26602 27663 - GT4
CAZyme Rep_3506_c_30 Rep_3506_c_30_26 27681 28814 - GT4
pfam Rep_3506_c_30 Rep_3506_c_30_27 28807 29715 - 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_7
pfam Rep_3506_c_30 Rep_3506_c_30_28 29712 30530 - HpcH_HpaI
TC Rep_3506_c_30 Rep_3506_c_30_29 30530 31165 - 9.B.18.1.3
Gene ID: Rep_3506_c_30_19
Type: CAZyme
Location: 20311 - 21261 (-)
Gene ID: Rep_3506_c_30_20
Type: CAZyme
Location: 21258 - 22274 (-)
Gene ID: Rep_3506_c_30_21
Type: pfam
Location: 22279 - 23520 (-)
Gene ID: Rep_3506_c_30_22
Type: CAZyme
Location: 23540 - 24667 (-)
Gene ID: Rep_3506_c_30_23
Type: CAZyme
Location: 24672 - 25670 (-)
Gene ID: Rep_3506_c_30_24
Type: pfam
Location: 25667 - 26593 (-)
Gene ID: Rep_3506_c_30_25
Type: CAZyme
Location: 26602 - 27663 (-)
Gene ID: Rep_3506_c_30_26
Type: CAZyme
Location: 27681 - 28814 (-)
Gene ID: Rep_3506_c_30_27
Type: pfam
Location: 28807 - 29715 (-)
Gene ID: Rep_3506_c_30_28
Type: pfam
Location: 29712 - 30530 (-)
Gene ID: Rep_3506_c_30_29
Type: TC
Location: 30530 - 31165 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Eubacterium_R
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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