Cluster: Rep_3506_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3506
- CGC Family ID: CGCFAM_02055
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3506_c_23 | Rep_3506_c_23_5 | 2480 | 4768 | + | GH31_15 |
| TF | Rep_3506_c_23 | Rep_3506_c_23_6 | 4876 | 5571 | + | LytTR |
| STP | Rep_3506_c_23 | Rep_3506_c_23_7 | 5580 | 6311 | + | HATPase_c |
| TC | Rep_3506_c_23 | Rep_3506_c_23_8 | 6427 | 8232 | + | 3.A.1.111.2 |
| TC | Rep_3506_c_23 | Rep_3506_c_23_9 | 8222 | 10057 | + | 3.A.1.111.2 |
Gene ID: Rep_3506_c_23_5
Type: CAZyme
Location: 2480 - 4768 (+)
Type: CAZyme
Location: 2480 - 4768 (+)
Gene ID: Rep_3506_c_23_6
Type: TF
Location: 4876 - 5571 (+)
Type: TF
Location: 4876 - 5571 (+)
Gene ID: Rep_3506_c_23_7
Type: STP
Location: 5580 - 6311 (+)
Type: STP
Location: 5580 - 6311 (+)
Gene ID: Rep_3506_c_23_8
Type: TC
Location: 6427 - 8232 (+)
Type: TC
Location: 6427 - 8232 (+)
Gene ID: Rep_3506_c_23_9
Type: TC
Location: 8222 - 10057 (+)
Type: TC
Location: 8222 - 10057 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.