Cluster: Rep_3506_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3506
- CGC Family ID: CGCFAM_00204
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3506_c_20 | Rep_3506_c_20_47 | 43774 | 46698 | + | GH38 |
| NULL(UNKNOWN) | Rep_3506_c_20 | Rep_3506_c_20_48 | 46698 | 47096 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_3506_c_20 | Rep_3506_c_20_49 | 47219 | 47596 | + | GntR |
| TC | Rep_3506_c_20 | Rep_3506_c_20_50 | 47593 | 48438 | + | 3.A.1.149.1 |
Gene ID: Rep_3506_c_20_47
Type: CAZyme
Location: 43774 - 46698 (+)
Type: CAZyme
Location: 43774 - 46698 (+)
Gene ID: Rep_3506_c_20_48
Type:
Location: 46698 - 47096 (+)
Type:
Location: 46698 - 47096 (+)
Gene ID: Rep_3506_c_20_49
Type: TF
Location: 47219 - 47596 (+)
Type: TF
Location: 47219 - 47596 (+)
Gene ID: Rep_3506_c_20_50
Type: TC
Location: 47593 - 48438 (+)
Type: TC
Location: 47593 - 48438 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.