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Cluster: Rep_3506_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3506_c_133 Rep_3506_c_133_20 14885 16345 - 3.A.1.32.2
TC Rep_3506_c_133 Rep_3506_c_133_21 16318 17172 - 3.A.1.32.2
pfam Rep_3506_c_133 Rep_3506_c_133_22 17195 17662 - CobA_CobO_BtuR
TC Rep_3506_c_133 Rep_3506_c_133_23 17659 18687 - 9.B.157.1.1
TC Rep_3506_c_133 Rep_3506_c_133_24 18788 21013 - 3.A.7.16.1
TC Rep_3506_c_133 Rep_3506_c_133_25 21141 22691 - 2.A.2.3.3
CAZyme Rep_3506_c_133 Rep_3506_c_133_26 22971 23996 + GH18
pfam Rep_3506_c_133 Rep_3506_c_133_27 24048 24608 + HAD
TC Rep_3506_c_133 Rep_3506_c_133_28 24706 25608 - 2.A.4.7.2
TC Rep_3506_c_133 Rep_3506_c_133_29 25761 25895 + 2.A.22.2.6
Gene ID: Rep_3506_c_133_20
Type: TC
Location: 14885 - 16345 (-)
Gene ID: Rep_3506_c_133_21
Type: TC
Location: 16318 - 17172 (-)
Gene ID: Rep_3506_c_133_22
Type: pfam
Location: 17195 - 17662 (-)
Gene ID: Rep_3506_c_133_23
Type: TC
Location: 17659 - 18687 (-)
Gene ID: Rep_3506_c_133_24
Type: TC
Location: 18788 - 21013 (-)
Gene ID: Rep_3506_c_133_25
Type: TC
Location: 21141 - 22691 (-)
Gene ID: Rep_3506_c_133_26
Type: CAZyme
Location: 22971 - 23996 (+)
Gene ID: Rep_3506_c_133_27
Type: pfam
Location: 24048 - 24608 (+)
Gene ID: Rep_3506_c_133_28
Type: TC
Location: 24706 - 25608 (-)
Gene ID: Rep_3506_c_133_29
Type: TC
Location: 25761 - 25895 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Eubacterium_R
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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