Cluster: Rep_3506_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: pectin
- Genome ID: Rep_3506
- CGC Family ID: CGCFAM_01818
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3506_c_130 | Rep_3506_c_130_2 | 698 | 1612 | - | 3.A.1.105.3 |
| NULL(UNKNOWN) | Rep_3506_c_130 | Rep_3506_c_130_3 | 1775 | 1927 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3506_c_130 | Rep_3506_c_130_4 | 2121 | 3479 | - | 2.A.66.1.32 |
| CAZyme | Rep_3506_c_130 | Rep_3506_c_130_5 | 3482 | 5401 | - | GH127 |
Gene ID: Rep_3506_c_130_2
Type: TC
Location: 698 - 1612 (-)
Type: TC
Location: 698 - 1612 (-)
Gene ID: Rep_3506_c_130_3
Type:
Location: 1775 - 1927 (-)
Type:
Location: 1775 - 1927 (-)
Gene ID: Rep_3506_c_130_4
Type: TC
Location: 2121 - 3479 (-)
Type: TC
Location: 2121 - 3479 (-)
Gene ID: Rep_3506_c_130_5
Type: CAZyme
Location: 3482 - 5401 (-)
Type: CAZyme
Location: 3482 - 5401 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.