Cluster: Rep_3506_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3506
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3506_c_124 | Rep_3506_c_124_5 | 2518 | 3336 | + | 3.A.1.3.11 |
| TC | Rep_3506_c_124 | Rep_3506_c_124_6 | 3428 | 4075 | + | 3.A.1.3.14 |
| TC | Rep_3506_c_124 | Rep_3506_c_124_7 | 4080 | 4892 | + | 3.A.1.3.6 |
| pfam | Rep_3506_c_124 | Rep_3506_c_124_8 | 4936 | 5655 | - | VTT_dom |
| CAZyme | Rep_3506_c_124 | Rep_3506_c_124_9 | 5642 | 6487 | - | GT8 |
| NULL(UNKNOWN) | Rep_3506_c_124 | Rep_3506_c_124_10 | 6704 | 9190 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3506_c_124 | Rep_3506_c_124_11 | 9162 | 10058 | - | 3.A.1.132.6 |
Gene ID: Rep_3506_c_124_5
Type: TC
Location: 2518 - 3336 (+)
Type: TC
Location: 2518 - 3336 (+)
Gene ID: Rep_3506_c_124_6
Type: TC
Location: 3428 - 4075 (+)
Type: TC
Location: 3428 - 4075 (+)
Gene ID: Rep_3506_c_124_7
Type: TC
Location: 4080 - 4892 (+)
Type: TC
Location: 4080 - 4892 (+)
Gene ID: Rep_3506_c_124_8
Type: pfam
Location: 4936 - 5655 (-)
Type: pfam
Location: 4936 - 5655 (-)
Gene ID: Rep_3506_c_124_9
Type: CAZyme
Location: 5642 - 6487 (-)
Type: CAZyme
Location: 5642 - 6487 (-)
Gene ID: Rep_3506_c_124_10
Type:
Location: 6704 - 9190 (-)
Type:
Location: 6704 - 9190 (-)
Gene ID: Rep_3506_c_124_11
Type: TC
Location: 9162 - 10058 (-)
Type: TC
Location: 9162 - 10058 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.