Cluster: Rep_3506_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3506
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3506_c_110 | Rep_3506_c_110_3 | 740 | 2215 | - | 2.A.2.3.6 |
| peptidase | Rep_3506_c_110 | Rep_3506_c_110_4 | 2232 | 2981 | - | S26.UPA |
| CAZyme | Rep_3506_c_110 | Rep_3506_c_110_5 | 2984 | 5329 | - | GH36 |
| pfam | Rep_3506_c_110 | Rep_3506_c_110_6 | 5342 | 5596 | - | TSCPD |
| CAZyme | Rep_3506_c_110 | Rep_3506_c_110_7 | 5785 | 6798 | + | GH179 |
Gene ID: Rep_3506_c_110_3
Type: TC
Location: 740 - 2215 (-)
Type: TC
Location: 740 - 2215 (-)
Gene ID: Rep_3506_c_110_4
Type: peptidase
Location: 2232 - 2981 (-)
Type: peptidase
Location: 2232 - 2981 (-)
Gene ID: Rep_3506_c_110_5
Type: CAZyme
Location: 2984 - 5329 (-)
Type: CAZyme
Location: 2984 - 5329 (-)
Gene ID: Rep_3506_c_110_6
Type: pfam
Location: 5342 - 5596 (-)
Type: pfam
Location: 5342 - 5596 (-)
Gene ID: Rep_3506_c_110_7
Type: CAZyme
Location: 5785 - 6798 (+)
Type: CAZyme
Location: 5785 - 6798 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3506_c_110_7 | vegetarian > omnivore | 2.23403 | 0.00915 |
| Rep_3506_c_110_7 | vegetarian > vegan | 1.59764 | 0.03722 |