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Cluster: Rep_3506_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3506_c_91 Rep_3506_c_91_13 15746 17161 + 2.A.2.3.1
peptidase Rep_3506_c_91 Rep_3506_c_91_14 17189 18523 + S09.UPW
CAZyme Rep_3506_c_91 Rep_3506_c_91_15 18523 20826 + GH31_2
pfam Rep_3506_c_91 Rep_3506_c_91_16 21089 22057 + ROK
TC Rep_3506_c_91 Rep_3506_c_91_17 22060 23619 + 2.A.2.3.6
pfam Rep_3506_c_91 Rep_3506_c_91_18 23645 24946 + Metallophos
pfam Rep_3506_c_91 Rep_3506_c_91_19 24966 27008 + DUF5054
CAZyme Rep_3506_c_91 Rep_3506_c_91_20 27022 30036 + GH2
CAZyme Rep_3506_c_91 Rep_3506_c_91_21 30046 31509 + GH18
Gene ID: Rep_3506_c_91_13
Type: TC
Location: 15746 - 17161 (+)
Gene ID: Rep_3506_c_91_14
Type: peptidase
Location: 17189 - 18523 (+)
Gene ID: Rep_3506_c_91_15
Type: CAZyme
Location: 18523 - 20826 (+)
Gene ID: Rep_3506_c_91_16
Type: pfam
Location: 21089 - 22057 (+)
Gene ID: Rep_3506_c_91_17
Type: TC
Location: 22060 - 23619 (+)
Gene ID: Rep_3506_c_91_18
Type: pfam
Location: 23645 - 24946 (+)
Gene ID: Rep_3506_c_91_19
Type: pfam
Location: 24966 - 27008 (+)
Gene ID: Rep_3506_c_91_20
Type: CAZyme
Location: 27022 - 30036 (+)
Gene ID: Rep_3506_c_91_21
Type: CAZyme
Location: 30046 - 31509 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Eubacterium_R
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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