Cluster: Rep_3506_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3506
- CGC Family ID: CGCFAM_06207
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3506_c_86 | Rep_3506_c_86_7 | 5670 | 7136 | - | 9.A.11.1.2 |
| pfam | Rep_3506_c_86 | Rep_3506_c_86_8 | 7229 | 7906 | + | DUF421 |
| pfam | Rep_3506_c_86 | Rep_3506_c_86_9 | 7903 | 8280 | + | DUF4363 |
| CAZyme | Rep_3506_c_86 | Rep_3506_c_86_10 | 8341 | 9282 | - | GH43_32 |
| pfam | Rep_3506_c_86 | Rep_3506_c_86_11 | 9376 | 9687 | - | DUF1284 |
| TC | Rep_3506_c_86 | Rep_3506_c_86_12 | 9684 | 10244 | - | 3.A.1.25.3 |
Gene ID: Rep_3506_c_86_7
Type: TC
Location: 5670 - 7136 (-)
Type: TC
Location: 5670 - 7136 (-)
Gene ID: Rep_3506_c_86_8
Type: pfam
Location: 7229 - 7906 (+)
Type: pfam
Location: 7229 - 7906 (+)
Gene ID: Rep_3506_c_86_9
Type: pfam
Location: 7903 - 8280 (+)
Type: pfam
Location: 7903 - 8280 (+)
Gene ID: Rep_3506_c_86_10
Type: CAZyme
Location: 8341 - 9282 (-)
Type: CAZyme
Location: 8341 - 9282 (-)
Gene ID: Rep_3506_c_86_11
Type: pfam
Location: 9376 - 9687 (-)
Type: pfam
Location: 9376 - 9687 (-)
Gene ID: Rep_3506_c_86_12
Type: TC
Location: 9684 - 10244 (-)
Type: TC
Location: 9684 - 10244 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.