Cluster: Rep_3505_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3505
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3505_c_0 | Rep_3505_c_0_687 | 622214 | 623044 | + | 3.A.1.26.7 |
| TC | Rep_3505_c_0 | Rep_3505_c_0_688 | 623029 | 623883 | + | 3.A.1.26.7 |
| TC | Rep_3505_c_0 | Rep_3505_c_0_689 | 623883 | 624674 | + | 3.A.1.25.4 |
| NULL(UNKNOWN) | Rep_3505_c_0 | Rep_3505_c_0_690 | 624690 | 624866 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3505_c_0 | Rep_3505_c_0_691 | 624911 | 625279 | + | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 |
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_692 | 625455 | 627836 | + | GH31_15 |
Gene ID: Rep_3505_c_0_687
Type: TC
Location: 622214 - 623044 (+)
Type: TC
Location: 622214 - 623044 (+)
Gene ID: Rep_3505_c_0_688
Type: TC
Location: 623029 - 623883 (+)
Type: TC
Location: 623029 - 623883 (+)
Gene ID: Rep_3505_c_0_689
Type: TC
Location: 623883 - 624674 (+)
Type: TC
Location: 623883 - 624674 (+)
Gene ID: Rep_3505_c_0_690
Type:
Location: 624690 - 624866 (+)
Type:
Location: 624690 - 624866 (+)
Gene ID: Rep_3505_c_0_691
Type: pfam
Location: 624911 - 625279 (+)
Type: pfam
Location: 624911 - 625279 (+)
Gene ID: Rep_3505_c_0_692
Type: CAZyme
Location: 625455 - 627836 (+)
Type: CAZyme
Location: 625455 - 627836 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.