Cluster: Rep_3505_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3505
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_676 | 611676 | 612812 | - | GH2 |
| NULL(UNKNOWN) | Rep_3505_c_0 | Rep_3505_c_0_677 | 612767 | 613186 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3505_c_0 | Rep_3505_c_0_678 | 613217 | 613792 | - | PRK |
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_679 | 613830 | 616031 | - | GH20 |
| TC | Rep_3505_c_0 | Rep_3505_c_0_680 | 616200 | 617546 | + | 2.A.66.1.22 |
Gene ID: Rep_3505_c_0_676
Type: CAZyme
Location: 611676 - 612812 (-)
Type: CAZyme
Location: 611676 - 612812 (-)
Gene ID: Rep_3505_c_0_677
Type:
Location: 612767 - 613186 (-)
Type:
Location: 612767 - 613186 (-)
Gene ID: Rep_3505_c_0_678
Type: pfam
Location: 613217 - 613792 (-)
Type: pfam
Location: 613217 - 613792 (-)
Gene ID: Rep_3505_c_0_679
Type: CAZyme
Location: 613830 - 616031 (-)
Type: CAZyme
Location: 613830 - 616031 (-)
Gene ID: Rep_3505_c_0_680
Type: TC
Location: 616200 - 617546 (+)
Type: TC
Location: 616200 - 617546 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.