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Cluster: Rep_3505_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3505_c_0 Rep_3505_c_0_581 514968 515771 + 2.A.2.3.6
pfam Rep_3505_c_0 Rep_3505_c_0_582 515716 516528 + MFS_2
pfam Rep_3505_c_0 Rep_3505_c_0_583 516532 517842 + Metallophos
CAZyme Rep_3505_c_0 Rep_3505_c_0_584 517863 519515 + GH36
pfam Rep_3505_c_0 Rep_3505_c_0_585 519533 520720 + DUF5054
pfam Rep_3505_c_0 Rep_3505_c_0_586 520780 521571 + DUF5054
CAZyme Rep_3505_c_0 Rep_3505_c_0_587 521577 524591 + GH2
CAZyme Rep_3505_c_0 Rep_3505_c_0_588 524601 526064 + GH18
Gene ID: Rep_3505_c_0_581
Type: TC
Location: 514968 - 515771 (+)
Gene ID: Rep_3505_c_0_582
Type: pfam
Location: 515716 - 516528 (+)
Gene ID: Rep_3505_c_0_583
Type: pfam
Location: 516532 - 517842 (+)
Gene ID: Rep_3505_c_0_584
Type: CAZyme
Location: 517863 - 519515 (+)
Gene ID: Rep_3505_c_0_585
Type: pfam
Location: 519533 - 520720 (+)
Gene ID: Rep_3505_c_0_586
Type: pfam
Location: 520780 - 521571 (+)
Gene ID: Rep_3505_c_0_587
Type: CAZyme
Location: 521577 - 524591 (+)
Gene ID: Rep_3505_c_0_588
Type: CAZyme
Location: 524601 - 526064 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Eubacterium_R
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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