Cluster: Rep_3505_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3505
- CGC Family ID: CGCFAM_10248
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3505_c_0 | Rep_3505_c_0_192 | 179371 | 180924 | - | 2.A.2.3.3 |
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_193 | 181104 | 182186 | + | GT2 |
| pfam | Rep_3505_c_0 | Rep_3505_c_0_194 | 182250 | 183764 | + | BclA_C |
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_195 | 183899 | 186994 | + | GH38 |
Gene ID: Rep_3505_c_0_192
Type: TC
Location: 179371 - 180924 (-)
Type: TC
Location: 179371 - 180924 (-)
Gene ID: Rep_3505_c_0_193
Type: CAZyme
Location: 181104 - 182186 (+)
Type: CAZyme
Location: 181104 - 182186 (+)
Gene ID: Rep_3505_c_0_194
Type: pfam
Location: 182250 - 183764 (+)
Type: pfam
Location: 182250 - 183764 (+)
Gene ID: Rep_3505_c_0_195
Type: CAZyme
Location: 183899 - 186994 (+)
Type: CAZyme
Location: 183899 - 186994 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.