Cluster: Rep_3505_CGC28
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3505
- CGC Family ID: CGCFAM_01133
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_2313 | 2219343 | 2220020 | - | GH51_1 |
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_2314 | 2219987 | 2220832 | - | GH51_1 |
| peptidase | Rep_3505_c_0 | Rep_3505_c_0_2315 | 2221051 | 2222046 | + | M24.UPB |
| TC | Rep_3505_c_0 | Rep_3505_c_0_2316 | 2222046 | 2223743 | + | 3.A.3.5.15 |
| TC | Rep_3505_c_0 | Rep_3505_c_0_2317 | 2223752 | 2224159 | + | 3.A.3.5.15 |
| STP | Rep_3505_c_0 | Rep_3505_c_0_2318 | 2224181 | 2224396 | + | HMA |
| TC | Rep_3505_c_0 | Rep_3505_c_0_2319 | 2224466 | 2225776 | - | 9.A.40.2.1 |
Gene ID: Rep_3505_c_0_2313
Type: CAZyme
Location: 2219343 - 2220020 (-)
Type: CAZyme
Location: 2219343 - 2220020 (-)
Gene ID: Rep_3505_c_0_2314
Type: CAZyme
Location: 2219987 - 2220832 (-)
Type: CAZyme
Location: 2219987 - 2220832 (-)
Gene ID: Rep_3505_c_0_2315
Type: peptidase
Location: 2221051 - 2222046 (+)
Type: peptidase
Location: 2221051 - 2222046 (+)
Gene ID: Rep_3505_c_0_2316
Type: TC
Location: 2222046 - 2223743 (+)
Type: TC
Location: 2222046 - 2223743 (+)
Gene ID: Rep_3505_c_0_2317
Type: TC
Location: 2223752 - 2224159 (+)
Type: TC
Location: 2223752 - 2224159 (+)
Gene ID: Rep_3505_c_0_2318
Type: STP
Location: 2224181 - 2224396 (+)
Type: STP
Location: 2224181 - 2224396 (+)
Gene ID: Rep_3505_c_0_2319
Type: TC
Location: 2224466 - 2225776 (-)
Type: TC
Location: 2224466 - 2225776 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.