Cluster: Rep_3505_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3505
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3505_c_0 | Rep_3505_c_0_2120 | 2044395 | 2045306 | + | 3.A.1.105.3 |
| pfam | Rep_3505_c_0 | Rep_3505_c_0_2121 | 2045303 | 2046202 | + | ABC2_membrane | ABC2_membrane_3 |
| TC | Rep_3505_c_0 | Rep_3505_c_0_2122 | 2046194 | 2047546 | - | 2.A.66.1.32 |
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_2123 | 2047582 | 2049507 | - | GH127 |
Gene ID: Rep_3505_c_0_2120
Type: TC
Location: 2044395 - 2045306 (+)
Type: TC
Location: 2044395 - 2045306 (+)
Gene ID: Rep_3505_c_0_2121
Type: pfam
Location: 2045303 - 2046202 (+)
Type: pfam
Location: 2045303 - 2046202 (+)
Gene ID: Rep_3505_c_0_2122
Type: TC
Location: 2046194 - 2047546 (-)
Type: TC
Location: 2046194 - 2047546 (-)
Gene ID: Rep_3505_c_0_2123
Type: CAZyme
Location: 2047582 - 2049507 (-)
Type: CAZyme
Location: 2047582 - 2049507 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.