Cluster: Rep_3505_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3505
- CGC Family ID: CGCFAM_01766
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_1756 | 1700154 | 1701962 | + | GH25 |
| pfam | Rep_3505_c_0 | Rep_3505_c_0_1757 | 1702142 | 1702921 | + | SpoU_methylase | MRM3-like_sub_bind |
| TC | Rep_3505_c_0 | Rep_3505_c_0_1758 | 1702918 | 1704123 | + | 3.A.11.1.3 |
Gene ID: Rep_3505_c_0_1756
Type: CAZyme
Location: 1700154 - 1701962 (+)
Type: CAZyme
Location: 1700154 - 1701962 (+)
Gene ID: Rep_3505_c_0_1757
Type: pfam
Location: 1702142 - 1702921 (+)
Type: pfam
Location: 1702142 - 1702921 (+)
Gene ID: Rep_3505_c_0_1758
Type: TC
Location: 1702918 - 1704123 (+)
Type: TC
Location: 1702918 - 1704123 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.