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Cluster: Rep_3505_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3505_c_0 Rep_3505_c_0_1474 1416622 1417203 - 3.D.1.4.2
TC Rep_3505_c_0 Rep_3505_c_0_1475 1417217 1418296 - 3.D.1.4.2
pfam Rep_3505_c_0 Rep_3505_c_0_1476 1418296 1418688 - Complex1_30kDa
TC Rep_3505_c_0 Rep_3505_c_0_1477 1418689 1419123 - 3.D.1.4.2
TC Rep_3505_c_0 Rep_3505_c_0_1478 1419127 1420014 - 3.D.1.4.2
TC Rep_3505_c_0 Rep_3505_c_0_1479 1420014 1421927 - 3.D.1.4.2
CAZyme Rep_3505_c_0 Rep_3505_c_0_1480 1422194 1423522 + CE4
TC Rep_3505_c_0 Rep_3505_c_0_1481 1423589 1425601 - 3.A.1.134.9
TC Rep_3505_c_0 Rep_3505_c_0_1482 1425598 1426362 - 3.A.1.134.4
STP Rep_3505_c_0 Rep_3505_c_0_1483 1426468 1427457 - HATPase_c
TF Rep_3505_c_0 Rep_3505_c_0_1484 1427477 1428148 - Trans_reg_C
TC Rep_3505_c_0 Rep_3505_c_0_1485 1428323 1429045 - 3.A.1.3.25
TC Rep_3505_c_0 Rep_3505_c_0_1486 1429029 1429736 - 3.A.1.3.20
TC Rep_3505_c_0 Rep_3505_c_0_1487 1429810 1430676 - 3.A.1.3.15
pfam Rep_3505_c_0 Rep_3505_c_0_1488 1430821 1431594 - KduI
STP Rep_3505_c_0 Rep_3505_c_0_1489 1431610 1432251 - TrkA_C
TC Rep_3505_c_0 Rep_3505_c_0_1490 1432287 1432667 - 2.A.38.4.3
TC Rep_3505_c_0 Rep_3505_c_0_1491 1432627 1433547 - 2.A.38.4.1
TC Rep_3505_c_0 Rep_3505_c_0_1492 1433729 1435612 - 9.B.18.2.1
Gene ID: Rep_3505_c_0_1474
Type: TC
Location: 1416622 - 1417203 (-)
Gene ID: Rep_3505_c_0_1475
Type: TC
Location: 1417217 - 1418296 (-)
Gene ID: Rep_3505_c_0_1476
Type: pfam
Location: 1418296 - 1418688 (-)
Gene ID: Rep_3505_c_0_1477
Type: TC
Location: 1418689 - 1419123 (-)
Gene ID: Rep_3505_c_0_1478
Type: TC
Location: 1419127 - 1420014 (-)
Gene ID: Rep_3505_c_0_1479
Type: TC
Location: 1420014 - 1421927 (-)
Gene ID: Rep_3505_c_0_1480
Type: CAZyme
Location: 1422194 - 1423522 (+)
Gene ID: Rep_3505_c_0_1481
Type: TC
Location: 1423589 - 1425601 (-)
Gene ID: Rep_3505_c_0_1482
Type: TC
Location: 1425598 - 1426362 (-)
Gene ID: Rep_3505_c_0_1483
Type: STP
Location: 1426468 - 1427457 (-)
Gene ID: Rep_3505_c_0_1484
Type: TF
Location: 1427477 - 1428148 (-)
Gene ID: Rep_3505_c_0_1485
Type: TC
Location: 1428323 - 1429045 (-)
Gene ID: Rep_3505_c_0_1486
Type: TC
Location: 1429029 - 1429736 (-)
Gene ID: Rep_3505_c_0_1487
Type: TC
Location: 1429810 - 1430676 (-)
Gene ID: Rep_3505_c_0_1488
Type: pfam
Location: 1430821 - 1431594 (-)
Gene ID: Rep_3505_c_0_1489
Type: STP
Location: 1431610 - 1432251 (-)
Gene ID: Rep_3505_c_0_1490
Type: TC
Location: 1432287 - 1432667 (-)
Gene ID: Rep_3505_c_0_1491
Type: TC
Location: 1432627 - 1433547 (-)
Gene ID: Rep_3505_c_0_1492
Type: TC
Location: 1433729 - 1435612 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Eubacterium_R
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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