Cluster: Rep_3505_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3505
- CGC Family ID: CGCFAM_00084
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_136 | 132153 | 133271 | - | GT28 |
| TC | Rep_3505_c_0 | Rep_3505_c_0_137 | 133297 | 133911 | - | 2.A.103.1.3 |
| pfam | Rep_3505_c_0 | Rep_3505_c_0_138 | 133911 | 134252 | - | FTSW_RODA_SPOVE |
| NULL(UNKNOWN) | Rep_3505_c_0 | Rep_3505_c_0_139 | 134267 | 134509 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3505_c_0 | Rep_3505_c_0_140 | 134551 | 135600 | - | 9.B.146.1.6 |
Gene ID: Rep_3505_c_0_136
Type: CAZyme
Location: 132153 - 133271 (-)
Type: CAZyme
Location: 132153 - 133271 (-)
Gene ID: Rep_3505_c_0_137
Type: TC
Location: 133297 - 133911 (-)
Type: TC
Location: 133297 - 133911 (-)
Gene ID: Rep_3505_c_0_138
Type: pfam
Location: 133911 - 134252 (-)
Type: pfam
Location: 133911 - 134252 (-)
Gene ID: Rep_3505_c_0_139
Type:
Location: 134267 - 134509 (-)
Type:
Location: 134267 - 134509 (-)
Gene ID: Rep_3505_c_0_140
Type: TC
Location: 134551 - 135600 (-)
Type: TC
Location: 134551 - 135600 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.