Cluster: Rep_3505_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3505
- CGC Family ID: CGCFAM_00022
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_1404 | 1351408 | 1352610 | - | GT4 |
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_1405 | 1352611 | 1353732 | - | GT4 |
| TC | Rep_3505_c_0 | Rep_3505_c_0_1406 | 1353817 | 1355085 | - | 9.B.18.1.2 |
| NULL(UNKNOWN) | Rep_3505_c_0 | Rep_3505_c_0_1407 | 1355108 | 1355314 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3505_c_0 | Rep_3505_c_0_1408 | 1355328 | 1356143 | - | 8.A.3.2.1 |
| TC | Rep_3505_c_0 | Rep_3505_c_0_1409 | 1356130 | 1356930 | - | 8.A.3.2.3 |
Gene ID: Rep_3505_c_0_1404
Type: CAZyme
Location: 1351408 - 1352610 (-)
Type: CAZyme
Location: 1351408 - 1352610 (-)
Gene ID: Rep_3505_c_0_1405
Type: CAZyme
Location: 1352611 - 1353732 (-)
Type: CAZyme
Location: 1352611 - 1353732 (-)
Gene ID: Rep_3505_c_0_1406
Type: TC
Location: 1353817 - 1355085 (-)
Type: TC
Location: 1353817 - 1355085 (-)
Gene ID: Rep_3505_c_0_1407
Type:
Location: 1355108 - 1355314 (-)
Type:
Location: 1355108 - 1355314 (-)
Gene ID: Rep_3505_c_0_1408
Type: TC
Location: 1355328 - 1356143 (-)
Type: TC
Location: 1355328 - 1356143 (-)
Gene ID: Rep_3505_c_0_1409
Type: TC
Location: 1356130 - 1356930 (-)
Type: TC
Location: 1356130 - 1356930 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.