Cluster: Rep_3505_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3505
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3505_c_0 | Rep_3505_c_0_1360 | 1305497 | 1306222 | + | 3.A.1.12.10 |
| pfam | Rep_3505_c_0 | Rep_3505_c_0_1361 | 1306234 | 1307151 | + | SUFBD_core |
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_1362 | 1307209 | 1309296 | - | GH36 |
Gene ID: Rep_3505_c_0_1360
Type: TC
Location: 1305497 - 1306222 (+)
Type: TC
Location: 1305497 - 1306222 (+)
Gene ID: Rep_3505_c_0_1361
Type: pfam
Location: 1306234 - 1307151 (+)
Type: pfam
Location: 1306234 - 1307151 (+)
Gene ID: Rep_3505_c_0_1362
Type: CAZyme
Location: 1307209 - 1309296 (-)
Type: CAZyme
Location: 1307209 - 1309296 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.