Cluster: Rep_3505_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3505
- CGC Family ID: CGCFAM_00909
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3505_c_0 | Rep_3505_c_0_1322 | 1261629 | 1264370 | - | 3.A.5.1.3 |
| NULL(UNKNOWN) | Rep_3505_c_0 | Rep_3505_c_0_1323 | 1264454 | 1265053 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3505_c_0 | Rep_3505_c_0_1324 | 1265308 | 1265862 | + | 9.B.18.1.2 |
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_1325 | 1265881 | 1267740 | + | GH2 |
| sulfatase | Rep_3505_c_0 | Rep_3505_c_0_1326 | 1267682 | 1268941 | + | S1_19 |
| pfam | Rep_3505_c_0 | Rep_3505_c_0_1327 | 1269076 | 1270503 | + | Radical_SAM |
| TC | Rep_3505_c_0 | Rep_3505_c_0_1328 | 1270588 | 1271865 | + | 9.A.40.2.2 |
Gene ID: Rep_3505_c_0_1322
Type: TC
Location: 1261629 - 1264370 (-)
Type: TC
Location: 1261629 - 1264370 (-)
Gene ID: Rep_3505_c_0_1323
Type:
Location: 1264454 - 1265053 (-)
Type:
Location: 1264454 - 1265053 (-)
Gene ID: Rep_3505_c_0_1324
Type: TC
Location: 1265308 - 1265862 (+)
Type: TC
Location: 1265308 - 1265862 (+)
Gene ID: Rep_3505_c_0_1325
Type: CAZyme
Location: 1265881 - 1267740 (+)
Type: CAZyme
Location: 1265881 - 1267740 (+)
Gene ID: Rep_3505_c_0_1326
Type: sulfatase
Location: 1267682 - 1268941 (+)
Type: sulfatase
Location: 1267682 - 1268941 (+)
Gene ID: Rep_3505_c_0_1327
Type: pfam
Location: 1269076 - 1270503 (+)
Type: pfam
Location: 1269076 - 1270503 (+)
Gene ID: Rep_3505_c_0_1328
Type: TC
Location: 1270588 - 1271865 (+)
Type: TC
Location: 1270588 - 1271865 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.