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Cluster: Rep_3505_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3505_c_0 Rep_3505_c_0_1192 1118007 1118858 + GH43_17
CAZyme Rep_3505_c_0 Rep_3505_c_0_1193 1119127 1121517 - GH2
CAZyme Rep_3505_c_0 Rep_3505_c_0_1194 1121611 1124031 + GH3
NULL(UNKNOWN) Rep_3505_c_0 Rep_3505_c_0_1195 1124198 1125148 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_3505_c_0 Rep_3505_c_0_1196 1125158 1126732 - 2.A.50.2.1
pfam Rep_3505_c_0 Rep_3505_c_0_1197 1126736 1126966 - PP-binding
TC Rep_3505_c_0 Rep_3505_c_0_1198 1127002 1128513 - 4.C.1.1.4
CAZyme Rep_3505_c_0 Rep_3505_c_0_1199 1129120 1130892 - GH27
Gene ID: Rep_3505_c_0_1192
Type: CAZyme
Location: 1118007 - 1118858 (+)
Gene ID: Rep_3505_c_0_1193
Type: CAZyme
Location: 1119127 - 1121517 (-)
Gene ID: Rep_3505_c_0_1194
Type: CAZyme
Location: 1121611 - 1124031 (+)
Gene ID: Rep_3505_c_0_1195
Type:
Location: 1124198 - 1125148 (-)
Gene ID: Rep_3505_c_0_1196
Type: TC
Location: 1125158 - 1126732 (-)
Gene ID: Rep_3505_c_0_1197
Type: pfam
Location: 1126736 - 1126966 (-)
Gene ID: Rep_3505_c_0_1198
Type: TC
Location: 1127002 - 1128513 (-)
Gene ID: Rep_3505_c_0_1199
Type: CAZyme
Location: 1129120 - 1130892 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
Eubacterium_R
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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