Cluster: Rep_3505_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3505
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3505_c_0 | Rep_3505_c_0_1178 | 1102779 | 1103252 | + | 3.D.1.6.2 |
| TC | Rep_3505_c_0 | Rep_3505_c_0_1179 | 1103254 | 1104999 | + | 3.D.1.5.1 |
| TC | Rep_3505_c_0 | Rep_3505_c_0_1180 | 1105017 | 1107239 | + | 3.D.1.5.1 |
| pfam | Rep_3505_c_0 | Rep_3505_c_0_1181 | 1107293 | 1107961 | + | cobW |
| pfam | Rep_3505_c_0 | Rep_3505_c_0_1182 | 1107961 | 1108299 | + | HypA |
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_1183 | 1108480 | 1110135 | - | GH13_31 |
Gene ID: Rep_3505_c_0_1178
Type: TC
Location: 1102779 - 1103252 (+)
Type: TC
Location: 1102779 - 1103252 (+)
Gene ID: Rep_3505_c_0_1179
Type: TC
Location: 1103254 - 1104999 (+)
Type: TC
Location: 1103254 - 1104999 (+)
Gene ID: Rep_3505_c_0_1180
Type: TC
Location: 1105017 - 1107239 (+)
Type: TC
Location: 1105017 - 1107239 (+)
Gene ID: Rep_3505_c_0_1181
Type: pfam
Location: 1107293 - 1107961 (+)
Type: pfam
Location: 1107293 - 1107961 (+)
Gene ID: Rep_3505_c_0_1182
Type: pfam
Location: 1107961 - 1108299 (+)
Type: pfam
Location: 1107961 - 1108299 (+)
Gene ID: Rep_3505_c_0_1183
Type: CAZyme
Location: 1108480 - 1110135 (-)
Type: CAZyme
Location: 1108480 - 1110135 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.