Cluster: Rep_3505_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3505
- CGC Family ID: CGCFAM_01468
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3505_c_0 | Rep_3505_c_0_1150 | 1075183 | 1077042 | - | 3.A.1.135.5 |
| TC | Rep_3505_c_0 | Rep_3505_c_0_1151 | 1077042 | 1078781 | - | 3.A.1.135.5 |
| TF | Rep_3505_c_0 | Rep_3505_c_0_1152 | 1078798 | 1079241 | - | MarR |
| pfam | Rep_3505_c_0 | Rep_3505_c_0_1153 | 1079393 | 1080241 | + | RrnaAD |
| TC | Rep_3505_c_0 | Rep_3505_c_0_1154 | 1080263 | 1081654 | + | 2.A.66.1.13 |
| peptidase | Rep_3505_c_0 | Rep_3505_c_0_1155 | 1081703 | 1082464 | - | S09.UPW |
| CAZyme | Rep_3505_c_0 | Rep_3505_c_0_1156 | 1082525 | 1083781 | - | GH27 |
Gene ID: Rep_3505_c_0_1150
Type: TC
Location: 1075183 - 1077042 (-)
Type: TC
Location: 1075183 - 1077042 (-)
Gene ID: Rep_3505_c_0_1151
Type: TC
Location: 1077042 - 1078781 (-)
Type: TC
Location: 1077042 - 1078781 (-)
Gene ID: Rep_3505_c_0_1152
Type: TF
Location: 1078798 - 1079241 (-)
Type: TF
Location: 1078798 - 1079241 (-)
Gene ID: Rep_3505_c_0_1153
Type: pfam
Location: 1079393 - 1080241 (+)
Type: pfam
Location: 1079393 - 1080241 (+)
Gene ID: Rep_3505_c_0_1154
Type: TC
Location: 1080263 - 1081654 (+)
Type: TC
Location: 1080263 - 1081654 (+)
Gene ID: Rep_3505_c_0_1155
Type: peptidase
Location: 1081703 - 1082464 (-)
Type: peptidase
Location: 1081703 - 1082464 (-)
Gene ID: Rep_3505_c_0_1156
Type: CAZyme
Location: 1082525 - 1083781 (-)
Type: CAZyme
Location: 1082525 - 1083781 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.