Cluster: Rep_3502_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3502
- CGC Family ID: CGCFAM_01698
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3502_c_3 | Rep_3502_c_3_3 | 1857 | 4457 | + | 3.A.12.1.1 |
| pfam | Rep_3502_c_3 | Rep_3502_c_3_4 | 4460 | 6316 | + | Radical_SAM_N | DUF3362 |
| TC | Rep_3502_c_3 | Rep_3502_c_3_5 | 6313 | 6768 | + | 3.A.11.1.4 |
| STP | Rep_3502_c_3 | Rep_3502_c_3_6 | 6765 | 7484 | + | Pribosyltran |
| CAZyme | Rep_3502_c_3 | Rep_3502_c_3_7 | 7510 | 9462 | - | GH31_4 |
Gene ID: Rep_3502_c_3_3
Type: TC
Location: 1857 - 4457 (+)
Type: TC
Location: 1857 - 4457 (+)
Gene ID: Rep_3502_c_3_4
Type: pfam
Location: 4460 - 6316 (+)
Type: pfam
Location: 4460 - 6316 (+)
Gene ID: Rep_3502_c_3_5
Type: TC
Location: 6313 - 6768 (+)
Type: TC
Location: 6313 - 6768 (+)
Gene ID: Rep_3502_c_3_6
Type: STP
Location: 6765 - 7484 (+)
Type: STP
Location: 6765 - 7484 (+)
Gene ID: Rep_3502_c_3_7
Type: CAZyme
Location: 7510 - 9462 (-)
Type: CAZyme
Location: 7510 - 9462 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944385025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.