Cluster: Rep_3502_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3502
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3502_c_2 | Rep_3502_c_2_37 | 41668 | 43143 | - | 2.A.2.3.6 |
| peptidase | Rep_3502_c_2 | Rep_3502_c_2_38 | 43149 | 43916 | - | S26.UPA |
| CAZyme | Rep_3502_c_2 | Rep_3502_c_2_39 | 43919 | 46273 | - | GH36 |
| pfam | Rep_3502_c_2 | Rep_3502_c_2_40 | 46287 | 46544 | - | TSCPD |
| CAZyme | Rep_3502_c_2 | Rep_3502_c_2_41 | 46733 | 47746 | + | GH179 |
Gene ID: Rep_3502_c_2_37
Type: TC
Location: 41668 - 43143 (-)
Type: TC
Location: 41668 - 43143 (-)
Gene ID: Rep_3502_c_2_38
Type: peptidase
Location: 43149 - 43916 (-)
Type: peptidase
Location: 43149 - 43916 (-)
Gene ID: Rep_3502_c_2_39
Type: CAZyme
Location: 43919 - 46273 (-)
Type: CAZyme
Location: 43919 - 46273 (-)
Gene ID: Rep_3502_c_2_40
Type: pfam
Location: 46287 - 46544 (-)
Type: pfam
Location: 46287 - 46544 (-)
Gene ID: Rep_3502_c_2_41
Type: CAZyme
Location: 46733 - 47746 (+)
Type: CAZyme
Location: 46733 - 47746 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944385025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.