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Cluster: Rep_3502_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3502_c_28 Rep_3502_c_28_3 2787 3542 + 3.A.1.103.1
TC Rep_3502_c_28 Rep_3502_c_28_4 3581 5377 - 3.A.1.111.2
TC Rep_3502_c_28 Rep_3502_c_28_5 5379 7193 - 3.A.1.111.2
STP Rep_3502_c_28 Rep_3502_c_28_6 7551 9254 + TPR_1 | TPR_1
pfam Rep_3502_c_28 Rep_3502_c_28_7 9247 9870 + DUF4125
TC Rep_3502_c_28 Rep_3502_c_28_8 9948 11666 - 3.A.1.106.2
pfam Rep_3502_c_28 Rep_3502_c_28_9 11844 13019 + Gly_kinase
pfam Rep_3502_c_28 Rep_3502_c_28_10 13451 14050 - Mn_catalase
CAZyme Rep_3502_c_28 Rep_3502_c_28_11 14154 15332 - GT4
Gene ID: Rep_3502_c_28_3
Type: TC
Location: 2787 - 3542 (+)
Gene ID: Rep_3502_c_28_4
Type: TC
Location: 3581 - 5377 (-)
Gene ID: Rep_3502_c_28_5
Type: TC
Location: 5379 - 7193 (-)
Gene ID: Rep_3502_c_28_6
Type: STP
Location: 7551 - 9254 (+)
Gene ID: Rep_3502_c_28_7
Type: pfam
Location: 9247 - 9870 (+)
Gene ID: Rep_3502_c_28_8
Type: TC
Location: 9948 - 11666 (-)
Gene ID: Rep_3502_c_28_9
Type: pfam
Location: 11844 - 13019 (+)
Gene ID: Rep_3502_c_28_10
Type: pfam
Location: 13451 - 14050 (-)
Gene ID: Rep_3502_c_28_11
Type: CAZyme
Location: 14154 - 15332 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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